You'll need to edit the job script, so it contains the commands and workflow that you want to submit to the scheduler. Under that, you will see the contents of the job script in a section named Submit Script. You'll see a green message at the top of the page indicating: "Job was successfully created".Īt the right of the Jobs page, you can see the Job Details, including the location of the script and the script name (by default, main_job.sh). To create a new job script, click the blue New Job > From Default Template button in the upper left. You'll find a default template there: " Simple Sequential Job". Go to the Jobs tab in the Jobs Composer interface. The Templates tab will allow you to define your own job templates. In the Jobs tab, you'll find a list of the job you've submitted through OnDemand. There are two tabs at the top: Jobs and Templates. You can create new job scripts, edit existing scripts, and submit them to the scheduler throught the Sherlock OnDemand interface.įrom the top menus in the Dashboard, choose Jobs > Job Composer. Toggle the display of owner and permisson settings Toggle the display of dotfiles (files starting by a. Open a terminal window on Sherlock in a new browser tabĬopy a file from your local machine to Sherlock Navigate to another directory or file system On the top left, just below the name of the current directory: Those buttons allow you to View, Edit, Rename, Download, Copy, Paste (after you have moved to a different directory) or Delete a file, or you can toggle the file selection with (Un)Select All.Īt the top of the window, on the right side: Button There are two sets of buttons in the File Explorer. No matter which directory you are in, your home directory is displayed in a panel on the left. The files in the selected directory are listed. $GROUP_SCRATCH and $OAK 1.Ĭhoosing one of the file spaces opens the File Explorer in a new browser tab.
A dropdown menu will appear, listing your most common storage locations on Sherlock: $HOME, $GROUP_HOME, $SCRATCH. To create, edit or move files, click on the Files menu from the Dashboard page.
Jupyter notebook online sign in install#
Except you don't need to install any SSH client on your local machine, configure Kerberos or deal with your SSH client configuration to avoid endless two-factor prompts. In the window that will open, you'll be logged in to one of Sherlock's login nodes, exactly as if you were using SSH to connect. You can get shell access to Sherlock by choosing Clusters > Sherlock Shell Access from the top menu in the OnDemand Dashboard.
To end your Sherlock OnDemand session, click on the "Log Out" link at the top right of the Dashboard window and close your browser. From there, you can use the menus across the top of the page to manage files, get a shell on Sherlock, submit jobs or open interactive applications such as Jupyter Notebooks or RStudio sessions. The Sherlock OnDemand Dashboard will then open.
You will be prompted for your SUNet ID and password, and will go through the regular two-step authentication process. Sherlock OnDemand requires the same level of authentication than connecting to Sherlock over SSH. To connect to Sherlock OnDemand, simply point your browser to